The testing – which is safe, confidential and optional – will be provided to Emergency Department patients aged 16 and over who are assessed at the Royal Infirmary of Edinburgh from 4 August, and at St Johns Hospital in Livingston from 1 September.
Thousands of young people in Lothian and the rest of Scotland are to be offered vaccination against meningococcal B disease (MenB) this summer.
NHS Lothian is taking some urgent precautions to help protect patients and staff against flu this winter.